Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT85687.1Taurine dioxygenase. (312 aa)    
Predicted Functional Partners:
GAT85690.1
Hypothetical protein.
 
    0.933
GAT85688.1
ABC transporter permease.
    0.897
GAT88522.1
Amino acid adenylation protein.
 
 
 0.855
GAT85689.1
ABC transporter ATP-binding protein.
 
    0.854
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 0.776
GAT86327.1
Monooxygenase.
 
 
  0.741
GAT87873.1
Alkanesulfonate monooxygenase.
 
 
 0.735
GAT87877.1
NtaA/SnaA/SoxA/DszA family monooxygenase.
 
 
  0.694
GAT88893.1
Hydrolase.
  
 
 0.694
GAT86093.1
Alpha-ketoglutarate decarboxylase.
   
 
 0.679
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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