Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT88833.1Branched-chain alpha-keto acid dehydrogenase subunit E2. (446 aa)    
Predicted Functional Partners:
GAT88834.1
2-oxoisovalerate dehydrogenase.
 0.990
GAT88281.1
Hypothetical protein.
 
 0.987
GAT88835.1
Pyruvate dehydrogenase.
 
 0.984
GAT86093.1
Alpha-ketoglutarate decarboxylase.
 
0.970
GAT86190.1
2-oxoisovalerate dehydrogenase subunit beta.
 0.969
GAT88121.1
Dihydrolipoamide dehydrogenase.
 0.963
GAT86234.1
2-oxoisovalerate dehydrogenase subunit beta.
 0.962
GAT89122.1
2-oxoisovalerate dehydrogenase subunit beta.
 0.961
GAT85550.1
2-oxoisovalerate dehydrogenase subunit beta.
 0.959
GAT86235.1
Pyruvate dehydrogenase E1 subunit alpha.
 
 0.933
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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