Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT85712.1Fatty acid-binding protein; May play a role in the intracellular transport of hydrophobic ligands. (199 aa)    
Predicted Functional Partners:
GAT85714.1
Folate-binding protein YgfZ; Belongs to the GcvT family.
 
    0.715
GAT85710.1
Permease.
       0.655
GAT85711.1
Hypothetical protein.
       0.651
GAT85836.1
Membrane protein.
  
     0.640
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.613
GAT87913.1
Hypothetical protein.
  
  
 0.613
GAT88328.1
Hypothetical protein.
  
  
 0.613
GAT85713.1
Flavodoxin.
       0.603
GAT88544.1
Hypothetical protein.
  
     0.563
GAT85913.1
Membrane protein.
  
     0.550
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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