Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT89128.1Carboxyvinyl-carboxyphosphonate phosphorylmutase. (282 aa)    
Predicted Functional Partners:
GAT88711.1
2-methylcitrate dehydratase.
 
 
 0.872
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 0.791
GAT88156.1
Aconitate hydratase.
  
 0.765
GAT87818.1
Malate synthase; Belongs to the malate synthase family.
   
 0.750
GAT87953.1
Malate synthase; Belongs to the malate synthase family.
   
 0.750
GAT88842.1
Malate synthase.
   
 0.750
GAT88713.1
Citrate synthase; Belongs to the citrate synthase family.
 
 
 0.748
GAT88900.1
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
 
  0.748
GAT85900.1
Type II citrate synthase; Belongs to the citrate synthase family.
  
 
 0.706
GAT85967.1
Hydrolase.
   
    0.682
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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