STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT85725.1Aspartate aminotransferase. (409 aa)    
Predicted Functional Partners:
pheA
Prephenate dehydratase.
 
  0.902
GAT88205.1
Glutamate synthase.
    
 0.896
GAT87514.1
Prephenate dehydratase.
 
 
  0.886
GAT88048.1
1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.844
GAT88058.1
Aspartate kinase; Belongs to the aspartokinase family.
 
 0.842
GAT88590.1
Aspartate aminotransferase.
  
  
 
0.836
GAT89120.1
Aminotransferase.
 
 
0.836
GAT86093.1
Alpha-ketoglutarate decarboxylase.
   
 0.829
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.826
GAT89698.1
Aspartate ammonia-lyase.
     
 0.825
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: low (12%) [HD]