Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT89233.13-hydroxyisobutyryl-CoA hydrolase. (354 aa)    
Predicted Functional Partners:
GAT89234.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
  0.993
GAT89235.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 
0.944
GAT85486.1
Histidine kinase.
  
 0.904
GAT89232.1
Methylmalonate-semialdehyde dehydrogenase.
  0.870
GAT87096.1
2-hydroxy-3-oxopropionate reductase.
 
 
  0.863
GAT85668.1
acyl-CoA dehydrogenase.
  
 0.854
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
  0.853
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
    
  0.852
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
  0.852
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
  0.852
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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