STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVCC1112_43-oxoacyl-ACP reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)    
Predicted Functional Partners:
GAT88205.1
Glutamate synthase.
     
 0.837
CVCC1112_3
Asp/Glu/hydantoin racemase.
 
     0.725
GAT88363.1
PTS lactose transporter subunit IIC.
  
 0.683
GAT87764.1
Hypothetical protein.
  
 
 0.665
GAT89003.1
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.659
GAT87551.1
Short-chain dehydrogenase.
  
     0.658
GAT85493.1
Ferredoxin.
   
 0.650
GAT87554.1
Ferredoxin.
   
 0.650
GAT89224.1
Oxidoreductase.
   
 0.650
GAT89447.1
Ferredoxin.
  
 0.639
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.