STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT89400.1Inner membrane amino-acid ABC transporter permease protein yecS. (244 aa)    
Predicted Functional Partners:
GAT89401.1
Arginine ABC transporter ATP-binding protein.
  0.996
GAT88845.1
ABC transporter, ATP-binding protein.
  0.984
GAT88465.1
Arginine ABC transporter ATP-binding protein.
  0.983
GAT85577.1
ABC transporter.
  0.981
GAT89434.1
Arginine ABC transporter ATP-binding protein.
  0.980
GAT88955.1
Arginine ABC transporter ATP-binding protein.
  0.978
GAT87389.1
ABC transporter.
 
  0.977
GAT88953.1
L-cystine-binding protein tcyA.
  0.977
GAT87416.1
Hypothetical protein.
  0.976
GAT85910.1
ABC transporter.
  0.976
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.