STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT89443.1GntR family transcriptional regulator. (223 aa)    
Predicted Functional Partners:
GAT87141.1
GntR family transcriptional regulator.
  
     0.773
GAT89696.1
GntR family transcriptional regulator.
  
    0.767
GAT88299.1
GntR family transcriptional regulator.
  
    0.718
GAT88264.1
Hypothetical protein.
  
     0.714
GAT85610.1
GntR family transcriptional regulator.
  
    0.702
GAT85410.1
GntR family transcriptional regulator.
  
    0.660
GAT89445.1
Sarcosine oxidase subunit beta.
 
    0.609
GAT89448.1
Sarcosine oxidase subunit gamma.
 
     0.605
GAT89447.1
Ferredoxin.
 
     0.590
GAT87093.1
Transcriptional regulator.
  
    0.584
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.