Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT86606.1 | GAT89459.1 | CVCC1112_1265 | CVCC1112_4118 | Major facilitator transporter. | Major facilitator transporter. | 0.732 |
GAT87721.1 | GAT89459.1 | CVCC1112_2380 | CVCC1112_4118 | Major facilitator superfamily permease. | Major facilitator transporter. | 0.401 |
GAT89458.1 | GAT89459.1 | CVCC1112_4117 | CVCC1112_4118 | Ribonuclease; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | Major facilitator transporter. | 0.491 |
GAT89459.1 | GAT86606.1 | CVCC1112_4118 | CVCC1112_1265 | Major facilitator transporter. | Major facilitator transporter. | 0.732 |
GAT89459.1 | GAT87721.1 | CVCC1112_4118 | CVCC1112_2380 | Major facilitator transporter. | Major facilitator superfamily permease. | 0.401 |
GAT89459.1 | GAT89458.1 | CVCC1112_4118 | CVCC1112_4117 | Major facilitator transporter. | Ribonuclease; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | 0.491 |