Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT86007.1 | GAT89466.1 | CVCC1112_667 | CVCC1112_4125 | Hypothetical protein. | Hypothetical protein. | 0.589 |
GAT88529.1 | GAT89466.1 | CVCC1112_3188 | CVCC1112_4125 | Hypothetical protein. | Hypothetical protein. | 0.416 |
GAT89463.1 | GAT89464.1 | CVCC1112_4122 | CVCC1112_4123 | ArsR family transcriptional regulator. | GNAT family acetyltransferase. | 0.570 |
GAT89463.1 | GAT89465.1 | CVCC1112_4122 | CVCC1112_4124 | ArsR family transcriptional regulator. | PadR family transcriptional regulator. | 0.411 |
GAT89463.1 | GAT89466.1 | CVCC1112_4122 | CVCC1112_4125 | ArsR family transcriptional regulator. | Hypothetical protein. | 0.411 |
GAT89464.1 | GAT89463.1 | CVCC1112_4123 | CVCC1112_4122 | GNAT family acetyltransferase. | ArsR family transcriptional regulator. | 0.570 |
GAT89464.1 | GAT89465.1 | CVCC1112_4123 | CVCC1112_4124 | GNAT family acetyltransferase. | PadR family transcriptional regulator. | 0.540 |
GAT89464.1 | GAT89466.1 | CVCC1112_4123 | CVCC1112_4125 | GNAT family acetyltransferase. | Hypothetical protein. | 0.540 |
GAT89464.1 | GAT89467.1 | CVCC1112_4123 | CVCC1112_4126 | GNAT family acetyltransferase. | ABC transporter. | 0.508 |
GAT89464.1 | GAT89468.1 | CVCC1112_4123 | CVCC1112_4127 | GNAT family acetyltransferase. | ABC transporter permease. | 0.508 |
GAT89465.1 | GAT89463.1 | CVCC1112_4124 | CVCC1112_4122 | PadR family transcriptional regulator. | ArsR family transcriptional regulator. | 0.411 |
GAT89465.1 | GAT89464.1 | CVCC1112_4124 | CVCC1112_4123 | PadR family transcriptional regulator. | GNAT family acetyltransferase. | 0.540 |
GAT89465.1 | GAT89466.1 | CVCC1112_4124 | CVCC1112_4125 | PadR family transcriptional regulator. | Hypothetical protein. | 0.956 |
GAT89465.1 | GAT89467.1 | CVCC1112_4124 | CVCC1112_4126 | PadR family transcriptional regulator. | ABC transporter. | 0.883 |
GAT89465.1 | GAT89468.1 | CVCC1112_4124 | CVCC1112_4127 | PadR family transcriptional regulator. | ABC transporter permease. | 0.888 |
GAT89465.1 | GAT89469.1 | CVCC1112_4124 | CVCC1112_4128 | PadR family transcriptional regulator. | Alanine glycine permease. | 0.433 |
GAT89466.1 | GAT86007.1 | CVCC1112_4125 | CVCC1112_667 | Hypothetical protein. | Hypothetical protein. | 0.589 |
GAT89466.1 | GAT88529.1 | CVCC1112_4125 | CVCC1112_3188 | Hypothetical protein. | Hypothetical protein. | 0.416 |
GAT89466.1 | GAT89463.1 | CVCC1112_4125 | CVCC1112_4122 | Hypothetical protein. | ArsR family transcriptional regulator. | 0.411 |
GAT89466.1 | GAT89464.1 | CVCC1112_4125 | CVCC1112_4123 | Hypothetical protein. | GNAT family acetyltransferase. | 0.540 |
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