Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAT89482.1PucR family transcriptional regulator. (400 aa)    
Predicted Functional Partners:
GAT85612.1
PucR family transcriptional regulator.
  
     0.706
GAT87130.1
(p)ppGpp synthetase.
  
     0.704
GAT86946.1
Hypothetical protein.
  
     0.693
GAT88601.1
Aminoglycoside resistance protein.
  
     0.669
GAT86126.1
Hypothetical protein.
  
     0.663
GAT87383.1
Hypothetical protein.
  
     0.657
GAT86353.1
TetR family transcriptional regulator.
  
     0.587
GAT86144.1
Hypothetical protein.
  
     0.579
GAT88032.1
TetR family transcriptional regulator.
  
     0.511
GAT86111.1
Oxidoreductase.
  
     0.509
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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