Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
GAT89515.1alpha-L-rhamnosidase. (860 aa)    
Predicted Functional Partners:
GAT89516.1
ABC transporter.
 
     0.777
GAT89517.1
ABC transporter.
 
     0.757
GAT86315.1
Sulfatase modifying factor 1.
 
   0.695
GAT89518.1
ABC transporter substrate-binding protein.
 
     0.692
GAT87405.1
Short-chain dehydrogenase.
 
 
  0.624
GAT87121.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 
   0.590
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
 
  0.560
GAT88064.1
Beta-glucosidase.
     0.538
GAT87404.1
Carbohydrate kinase.
 
     0.533
GAT85625.1
alpha-L-fucosidase.
  
     0.508
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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