Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT89603.1Cobyrinic acid ac-diamide synthase. (214 aa)    
Predicted Functional Partners:
GAT87212.1
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.946
GAT89604.1
Hypothetical protein.
       0.773
GAT87211.1
Chromosome partitioning protein.
  
     0.771
GAT88706.1
Chromosome partitioning protein ParA.
  
     0.769
GAT88690.1
Chromosome partitioning protein ParA.
  
     0.614
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.565
GAT89602.1
Hypothetical protein M707_20970.
       0.476
GAT85479.1
Hypothetical protein.
  
   0.463
GAT87192.1
Glycosyl transferase.
  
   0.463
GAT87669.1
Cellulose synthase.
  
   0.463
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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