STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT89703.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
GAT89702.1
Aldo/keto reductase.
    0.944
GAT89701.1
Amidohydrolase.
 
  
 0.888
GAT89705.1
Fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.874
GAT89704.1
alpha-L-fucosidase.
 
     0.850
GAT87406.1
Rhamnose isomerase.
    
 0.816
GAT89707.1
Short-chain dehydrogenase.
 
    0.750
GAT87404.1
Carbohydrate kinase.
  
  
 0.607
GAT87429.1
Xylulokinase; Belongs to the FGGY kinase family.
  
  
 0.607
GAT88803.1
Sugar phosphate isomerase.
  
    0.583
GAT89706.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
       0.562
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: low (30%) [HD]