Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT87404.1 | GAT87406.1 | CVCC1112_2063 | CVCC1112_2065 | Carbohydrate kinase. | Rhamnose isomerase. | 0.995 |
GAT87404.1 | GAT89703.1 | CVCC1112_2063 | CVCC1112_4362 | Carbohydrate kinase. | Hypothetical protein. | 0.607 |
GAT87406.1 | GAT87404.1 | CVCC1112_2065 | CVCC1112_2063 | Rhamnose isomerase. | Carbohydrate kinase. | 0.995 |
GAT87406.1 | GAT87429.1 | CVCC1112_2065 | CVCC1112_2088 | Rhamnose isomerase. | Xylulokinase; Belongs to the FGGY kinase family. | 0.705 |
GAT87406.1 | GAT89703.1 | CVCC1112_2065 | CVCC1112_4362 | Rhamnose isomerase. | Hypothetical protein. | 0.816 |
GAT87429.1 | GAT87406.1 | CVCC1112_2088 | CVCC1112_2065 | Xylulokinase; Belongs to the FGGY kinase family. | Rhamnose isomerase. | 0.705 |
GAT87429.1 | GAT88803.1 | CVCC1112_2088 | CVCC1112_3462 | Xylulokinase; Belongs to the FGGY kinase family. | Sugar phosphate isomerase. | 0.640 |
GAT87429.1 | GAT89703.1 | CVCC1112_2088 | CVCC1112_4362 | Xylulokinase; Belongs to the FGGY kinase family. | Hypothetical protein. | 0.607 |
GAT88803.1 | GAT87429.1 | CVCC1112_3462 | CVCC1112_2088 | Sugar phosphate isomerase. | Xylulokinase; Belongs to the FGGY kinase family. | 0.640 |
GAT88803.1 | GAT89703.1 | CVCC1112_3462 | CVCC1112_4362 | Sugar phosphate isomerase. | Hypothetical protein. | 0.583 |
GAT89701.1 | GAT89702.1 | CVCC1112_4360 | CVCC1112_4361 | Amidohydrolase. | Aldo/keto reductase. | 0.995 |
GAT89701.1 | GAT89703.1 | CVCC1112_4360 | CVCC1112_4362 | Amidohydrolase. | Hypothetical protein. | 0.888 |
GAT89701.1 | GAT89704.1 | CVCC1112_4360 | CVCC1112_4363 | Amidohydrolase. | alpha-L-fucosidase. | 0.834 |
GAT89701.1 | GAT89705.1 | CVCC1112_4360 | CVCC1112_4364 | Amidohydrolase. | Fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.992 |
GAT89701.1 | GAT89706.1 | CVCC1112_4360 | CVCC1112_4365 | Amidohydrolase. | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase. | 0.699 |
GAT89701.1 | GAT89707.1 | CVCC1112_4360 | CVCC1112_4366 | Amidohydrolase. | Short-chain dehydrogenase. | 0.865 |
GAT89702.1 | GAT89701.1 | CVCC1112_4361 | CVCC1112_4360 | Aldo/keto reductase. | Amidohydrolase. | 0.995 |
GAT89702.1 | GAT89703.1 | CVCC1112_4361 | CVCC1112_4362 | Aldo/keto reductase. | Hypothetical protein. | 0.944 |
GAT89702.1 | GAT89704.1 | CVCC1112_4361 | CVCC1112_4363 | Aldo/keto reductase. | alpha-L-fucosidase. | 0.800 |
GAT89702.1 | GAT89705.1 | CVCC1112_4361 | CVCC1112_4364 | Aldo/keto reductase. | Fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.943 |
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