Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT89732.1Cation transporter. (433 aa)    
Predicted Functional Partners:
GAT87531.1
Membrane protein.
    
 0.782
GAT87532.1
Cation-transporting ATPase.
    
 0.782
atpE
ATP synthase F0 subcomplex subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.711
GAT87948.1
Phosphatidic acid phosphatase.
 
  
  0.545
GAT89733.1
3-(2-hydroxyphenyl) propionic acid transporter.
       0.538
GAT86074.1
Peptidase M23.
    
 0.533
GAT85353.1
Hypothetical protein.
     
  0.523
GAT86951.1
ATPase.
     
  0.523
smc
Chromosome partitioning protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
     
  0.523
GAT87237.1
PA-phosphatase.
   
  0.503
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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