Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT89743.1Histidine kinase. (394 aa)    
Predicted Functional Partners:
GAT85486.1
Histidine kinase.
 
 
 
0.946
GAT86640.1
Allantoin permease.
 
      0.869
GAT85485.1
Diguanylate cyclase.
   
 0.857
GAT88980.1
Alkaline phosphatase.
 
 
 0.795
GAT86645.1
Chemotaxis protein CheY.
 
 
 
 0.792
GAT88578.1
PhoB family transcriptional regulator.
 
 
 
 0.791
GAT86014.1
XRE family transcriptional regulator.
 
 
 
 0.790
GAT87940.1
Chemotaxis protein CheY.
 
   
 0.785
GAT87778.1
XRE family transcriptional regulator.
 
 
 
 0.775
GAT86276.1
Hypothetical protein.
 
 
 
 0.771
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.