Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
GAT89801.1Sugar ABC transporter substrate-binding protein. (331 aa)    
Predicted Functional Partners:
GAT89803.1
ABC transporter ATP-binding protein.
 
 0.991
GAT89802.1
Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.969
GAT85486.1
Histidine kinase.
   
 
 0.952
GAT89799.1
5-deoxyglucuronate isomerase.
 
  
 0.794
GAT89301.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
   
 
 0.729
GAT88466.1
Polar amino acid ABC transporter inner membrane protein.
     
 0.723
GAT88467.1
Hypothetical protein.
     
 0.723
GAT89640.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.720
GAT87389.1
ABC transporter.
     
 0.713
GAT87751.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.701
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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