STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT85790.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
GAT85789.1
Pilus biosynthesis protein.
 
    0.956
GAT85788.1
Pilus biosynthesis protein CpaE.
 
    0.944
GAT85785.1
Secretion system protein.
 
    0.912
GAT85786.1
Type II secretion system protein F.
 
    0.896
GAT85791.1
Hypothetical protein.
       0.809
GAT85787.1
Pilus assembly protein CpaF.
 
    0.728
GAT85792.1
Flp/Fap pilin protein.
  
  
 0.703
GAT85793.1
Peptidase.
 
     0.576
GAT85840.1
Flagellar basal body P-ring biosynthesis protein FlgA.
  
    0.543
GAT85381.1
Hypothetical protein.
  
    0.540
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.