Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT89881.14-hydroxybenzoate 3-monooxygenase. (395 aa)    
Predicted Functional Partners:
GAT87358.1
Protocatechuate 4,5-dioxygenase subunit beta.
 
 
 0.986
GAT87359.1
Protocatechuate 4,5-dioxygenase subunit alpha.
 
 
 0.986
GAT87360.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
   
 0.788
GAT87362.1
4-carboxymuconolactone decarboxylase.
 
   
 0.773
GAT88292.1
Intradiol ring-cleavage dioxygenase.
 
  
 0.739
GAT87361.1
Alpha/beta hydrolase.
 
  0.719
GAT87357.1
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.718
GAT87802.1
Aldehyde oxidase.
  
 
 0.709
GAT86843.1
Hypothetical protein.
   
 0.704
GAT87584.1
SAM-dependent methyltransferase.
   
 0.704
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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