Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAT85840.1Flagellar basal body P-ring biosynthesis protein FlgA. (238 aa)    
Predicted Functional Partners:
GAT85381.1
Hypothetical protein.
 
  
 0.913
GAT85792.1
Flp/Fap pilin protein.
  
  
 0.744
GAT85785.1
Secretion system protein.
  
  
 0.737
GAT85788.1
Pilus biosynthesis protein CpaE.
  
  
 0.715
GAT85384.1
Hypothetical protein.
 
  
 0.658
GAT85383.1
Hypothetical protein.
 
  
 0.624
GAT86135.1
Hypothetical protein.
  
     0.608
GAT85841.1
FmdB family transcriptional regulator.
  
  
 0.598
GAT86554.1
Membrane protein.
  
     0.585
GAT85486.1
Histidine kinase.
  
    0.557
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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