Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GAT85956.1Peptide ABC transporter ATP-binding protein. (245 aa)    
Predicted Functional Partners:
GAT88466.1
Polar amino acid ABC transporter inner membrane protein.
 0.995
GAT85957.1
Amino acid ABC transporter permease.
  0.994
GAT85958.1
Amino acid ABC transporter.
 
  0.981
GAT88846.1
Amino acid ABC transporter permease.
  0.971
GAT85578.1
ABC transporter permease.
  0.960
GAT88954.1
Cysteine ABC transporter permease.
  0.959
GAT89400.1
Inner membrane amino-acid ABC transporter permease protein yecS.
  0.959
GAT88467.1
Hypothetical protein.
 
 0.958
GAT87418.1
Hypothetical protein.
  0.939
GAT87388.1
Amino acid ABC transporter permease.
  0.938
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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