STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT85977.1GlcNAc-PI de-N-acetylase. (259 aa)    
Predicted Functional Partners:
GAT85976.1
Electron transfer flavoprotein subunit alpha.
       0.773
GAT85975.1
Electron transfer flavoprotein subunit beta.
       0.737
GAT85811.1
Glycoside hydrolase.
    
  0.685
GAT85978.1
Holin.
       0.563
GAT85979.1
Gluconate transporter.
       0.563
mshD
Mycothiol acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
  
     0.537
GAT89094.1
Hypothetical protein.
  
 
  0.483
GAT85389.1
GCN5 family acetyltransferase.
  
     0.470
GAT88882.1
Methylitaconate delta2-delta3-isomerase.
    
  0.426
GAT86139.1
N-acetylglucosamine 6-phosphate deacetylase.
     
 0.425
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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