Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAT85408.1Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (445 aa)    
Predicted Functional Partners:
GAT88205.1
Glutamate synthase.
  
 0.998
GAT88636.1
Glutamine synthetase.
  
 
 0.988
GAT88641.1
Glutamine synthetase.
  
 
 0.988
GAT86369.1
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.978
glsA
Glutaminase; Belongs to the glutaminase family.
     
 0.976
GAT88206.1
Dihydropyrimidine dehydrogenase subunit A.
  
 
 0.969
GAT89063.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
 0.963
GAT86368.1
Nitrite reductase.
     
  0.962
GAT86093.1
Alpha-ketoglutarate decarboxylase.
  
 0.949
GAT88048.1
1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.948
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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