Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT86038.1ABC transporter ATP-binding protein. (242 aa)    
Predicted Functional Partners:
GAT86037.1
Sugar ABC transporter permease.
 
 0.999
GAT86514.1
ABC transporter.
  
 0.985
GAT89321.1
Hypothetical protein.
  
 
 0.946
GAT86036.1
Glycosyl transferase.
 
  
 0.912
GAT86035.1
UDP-galactopyranose mutase.
 
  
 0.879
GAT86805.1
Hypothetical protein.
 
 
 0.803
GAT86804.1
Hypothetical protein.
  
 
 0.773
GAT86017.1
Phosphoribosyl transferase.
   
    0.761
GAT86807.1
Bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
   
 0.723
GAT86124.1
Glycosyl transferase.
 
  
 0.706
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.