Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT86079.1DtxR family transcriptional regulator. (237 aa)    
Predicted Functional Partners:
GAT86098.1
ABC transporter permease.
  
 
 0.834
GAT86080.1
Ubiquinone biosynthesis protein.
       0.773
GAT88466.1
Polar amino acid ABC transporter inner membrane protein.
     
  0.752
GAT88467.1
Hypothetical protein.
     
  0.752
GAT85877.1
ABC transporter permease.
  
  
  0.726
abo
Putative glycine cleavage system T protein; Catalyzes the oxidative demethylation of 4- methylaminobutanoate produced from the pyrrolidine ring of nicotine. To a much lesser extent, can also use sarcosine as substrate, but is not active against dimethylglycine, methylaminopropionitrile, methylaminopropylamine, and alpha-methylaminobutanoate. Belongs to the GcvT family.
     
  0.724
GAT89532.1
Sarcosine dehydrogenase; Belongs to the GcvT family.
     
  0.724
GAT86096.1
ABC transporter substrate-binding protein.
  
 
 0.721
GAT86541.1
Phosphonate ABC transporter substrate-binding protein.
   
 
  0.718
GAT89301.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
     
  0.717
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.