STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT86146.1Oxidoreductase. (366 aa)    
Predicted Functional Partners:
GAT88205.1
Glutamate synthase.
    
 0.867
GAT86632.1
12-oxophytodienoate reductase.
  
  
 
0.780
GAT85992.1
NADH:flavin oxidoreductase.
  
  
 
0.778
GAT86145.1
Thioredoxin.
       0.773
GAT88836.1
Electron transfer flavoprotein subunit beta.
  
   0.744
GAT85975.1
Electron transfer flavoprotein subunit beta.
  
   0.744
GAT87764.1
Hypothetical protein.
    
  0.727
GAT89428.1
Flavoprotein.
    
 0.714
GAT87780.1
CarD family transcriptional regulator.
   
    0.707
GAT88162.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.661
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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