Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT86176.1Nitrate ABC transporter permease. (258 aa)    
Predicted Functional Partners:
GAT86175.1
Sulfonate ABC transporter substrate-binding protein.
 
  0.984
GAT86178.1
ABC transporter.
 
  0.979
GAT85689.1
ABC transporter ATP-binding protein.
 
  0.956
GAT87556.1
Hypothetical protein.
 
  0.954
GAT85594.1
Sulfate ABC transporter ATP-binding protein.
 
  0.951
GAT87559.1
Hypothetical protein.
 
  0.950
GAT86177.1
Nitrate ABC transporter permease.
 
  
 
0.929
GAT85690.1
Hypothetical protein.
 
  0.881
GAT85593.1
Sulfonate ABC transporter substrate-binding protein.
 
  0.871
GAT85595.1
Sulfate ABC transporter permease.
  
     0.771
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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