STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT86226.1Peptide ABC transporter ATP-binding protein. (264 aa)    
Predicted Functional Partners:
GAT86225.1
Cell division protein FtsX.
  0.995
GAT87228.1
ABC transporter substrate-binding protein.
 
 0.951
GAT87998.1
Permease.
 
 
0.912
GAT88270.1
Hypothetical protein.
 
     0.908
GAT86534.1
Multidrug ABC transporter substrate-binding protein.
  
  0.888
GAT88269.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.883
GAT86740.1
Hypothetical protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
0.879
GAT87793.1
Hypothetical protein M707_21210; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
0.877
GAT88325.1
Hypothetical protein.
  
 0.813
GAT88466.1
Polar amino acid ABC transporter inner membrane protein.
 
  
  0.803
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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