Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT86234.12-oxoisovalerate dehydrogenase subunit beta. (336 aa)    
Predicted Functional Partners:
GAT85549.1
Pyruvate dehydrogenase E1 subunit alpha.
 0.999
GAT89121.1
Pyruvate dehydrogenase.
 0.999
GAT86191.1
Pyruvate dehydrogenase.
 0.999
GAT86235.1
Pyruvate dehydrogenase E1 subunit alpha.
 0.999
GAT86233.1
Dihydrolipoamide acyltransferase.
 0.996
GAT88835.1
Pyruvate dehydrogenase.
 0.995
GAT88121.1
Dihydrolipoamide dehydrogenase.
 0.990
GAT85551.1
Branched-chain alpha-keto acid dehydrogenase subunit E2.
 0.987
GAT89123.1
Branched-chain alpha-keto acid dehydrogenase subunit E2.
 0.984
GAT86093.1
Alpha-ketoglutarate decarboxylase.
   
 0.980
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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