STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT86300.1Sugar isomerase. (305 aa)    
Predicted Functional Partners:
GAT86298.1
Ribokinase.
 
  
 0.941
GAT86297.1
Fructose-bisphosphate aldolase.
 
     0.925
GAT86296.1
Alkaline phosphatase.
 
     0.884
GAT86299.1
Glucokinase.
 
  
  0.880
GAT86139.1
N-acetylglucosamine 6-phosphate deacetylase.
  
 
 0.824
GAT88100.1
Hypothetical protein.
 
    0.666
GAT86732.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
  
  0.656
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
    
 0.635
GAT86302.1
Hypothetical protein.
 
     0.616
GAT88364.1
Phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
    
 0.603
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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