STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKO84178.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)    
Predicted Functional Partners:
KKO83136.1
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.931
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
     
 0.927
hpt
Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.921
add
Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.908
pncA
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.905
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.861
KKO84179.1
Glycosyl transferase family 9; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.798
metQ
Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
metN2
ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
       0.773
metI2
Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
Your Current Organism:
Corynebacterium otitidis
NCBI taxonomy Id: 29321
Other names: ATCC 51513, C. otitidis, CCUG 32254, CDC coryneform group ANF-1 like, CIP 104075, DSM 8821, JCM 12146, LMG 19071, LMG:19071, Turicella otitidis, strain 234/92
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