STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWH48_02965Spore gernimation protein KB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)    
Predicted Functional Partners:
OAH57983.1
Spore gernimation protein KC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.947
OAH58045.1
Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.939
OAH57794.1
Spore gernimation protein KC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
OAH57981.1
Spore gernimation protein KC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
AWH48_14130
Spore gernimation protein KB; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
OAH58620.1
Spore gernimation protein KC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
AWH48_20050
Spore gernimation protein KB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
OAH52808.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.768
OAH58340.1
Spore gernimation protein GerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.765
OAH53952.1
Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.743
Your Current Organism:
Domibacillus aminovorans
NCBI taxonomy Id: 29332
Other names: Bacillus aminovorans, D. aminovorans, LMG 16796, LMG:16796
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.