STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAH53049.1Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0761 family. (281 aa)    
Predicted Functional Partners:
OAH53050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.846
OAH54627.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.604
OAH53051.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.521
OAH53052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0435 family.
 
     0.507
OAH53046.1
Cation transporter; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
  
    0.475
OAH57697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.416
rsbW
Anti-sigma B factor RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
  
    0.416
OAH54426.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.415
Your Current Organism:
Domibacillus aminovorans
NCBI taxonomy Id: 29332
Other names: Bacillus aminovorans, D. aminovorans, LMG 16796, LMG:16796
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.