STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAH52910.1Spore gernimation protein GerD; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)    
Predicted Functional Partners:
OAH54396.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OAH57618.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OAH56001.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.772
OAH53834.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
OAH58505.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
OAH54392.1
Spore coat protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
OAH58451.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
OAH53558.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
sspI
Small, acid-soluble spore protein I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspI family.
  
     0.748
OAH55985.1
Stage III sporulation protein AH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
Your Current Organism:
Domibacillus aminovorans
NCBI taxonomy Id: 29332
Other names: Bacillus aminovorans, D. aminovorans, LMG 16796, LMG:16796
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.