STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAH58430.1Siderophore biosynthesis protein SbnG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (268 aa)    
Predicted Functional Partners:
OAH58432.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.904
OAH58433.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.886
OAH58487.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.863
OAH58429.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.851
OAH58431.1
Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
     0.837
OAH53618.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.781
OAH54737.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.682
mtnB
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
  
 
  0.665
OAH56785.1
Dipeptide epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.645
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
 
 0.599
Your Current Organism:
Domibacillus aminovorans
NCBI taxonomy Id: 29332
Other names: Bacillus aminovorans, D. aminovorans, LMG 16796, LMG:16796
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