Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CCDG5_0049 | CCDG5_0050 | Hypothetical protein; Family membership. | Peptidoglycan glycosyltransferase; High confidence in function and specificity. | 0.425 |
CCDG5_0049 | CCDG5_0254 | Hypothetical protein; Family membership. | Putative membrane protein. | 0.783 |
CCDG5_0049 | CCDG5_0255 | Hypothetical protein; Family membership. | Hypothetical protein; Family membership. | 0.810 |
CCDG5_0049 | CCDG5_0493 | Hypothetical protein; Family membership. | PpiC-type peptidyl-prolyl cis-trans isomerase; High confidence in function and specificity. | 0.442 |
CCDG5_0049 | CCDG5_1416 | Hypothetical protein; Family membership. | ABC transporter ATP-binding protein; High confidence in function and specificity. | 0.785 |
CCDG5_0049 | CCDG5_1417 | Hypothetical protein; Family membership. | Hypothetical protein; High confidence in function and specificity. | 0.784 |
CCDG5_0049 | CCDG5_1645 | Hypothetical protein; Family membership. | Membrane-associated zinc metalloprotease; High confidence in function and specificity. | 0.420 |
CCDG5_0050 | CCDG5_0049 | Peptidoglycan glycosyltransferase; High confidence in function and specificity. | Hypothetical protein; Family membership. | 0.425 |
CCDG5_0254 | CCDG5_0049 | Putative membrane protein. | Hypothetical protein; Family membership. | 0.783 |
CCDG5_0254 | CCDG5_0255 | Putative membrane protein. | Hypothetical protein; Family membership. | 0.956 |
CCDG5_0254 | CCDG5_1416 | Putative membrane protein. | ABC transporter ATP-binding protein; High confidence in function and specificity. | 0.956 |
CCDG5_0254 | CCDG5_1417 | Putative membrane protein. | Hypothetical protein; High confidence in function and specificity. | 0.948 |
CCDG5_0255 | CCDG5_0049 | Hypothetical protein; Family membership. | Hypothetical protein; Family membership. | 0.810 |
CCDG5_0255 | CCDG5_0254 | Hypothetical protein; Family membership. | Putative membrane protein. | 0.956 |
CCDG5_0255 | CCDG5_1416 | Hypothetical protein; Family membership. | ABC transporter ATP-binding protein; High confidence in function and specificity. | 0.815 |
CCDG5_0255 | CCDG5_1417 | Hypothetical protein; Family membership. | Hypothetical protein; High confidence in function and specificity. | 0.809 |
CCDG5_0493 | CCDG5_0049 | PpiC-type peptidyl-prolyl cis-trans isomerase; High confidence in function and specificity. | Hypothetical protein; Family membership. | 0.442 |
CCDG5_1416 | CCDG5_0049 | ABC transporter ATP-binding protein; High confidence in function and specificity. | Hypothetical protein; Family membership. | 0.785 |
CCDG5_1416 | CCDG5_0254 | ABC transporter ATP-binding protein; High confidence in function and specificity. | Putative membrane protein. | 0.956 |
CCDG5_1416 | CCDG5_0255 | ABC transporter ATP-binding protein; High confidence in function and specificity. | Hypothetical protein; Family membership. | 0.815 |
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