node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCDG5_0150 | ispE | CCDG5_0150 | CCDG5_1370 | Hypothetical protein; Family membership. | Hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.769 |
CCDG5_0150 | rsmA | CCDG5_0150 | CCDG5_0317 | Hypothetical protein; Family membership. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.871 |
ispE | CCDG5_0150 | CCDG5_1370 | CCDG5_0150 | Hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Hypothetical protein; Family membership. | 0.769 |
ispE | rsmA | CCDG5_1370 | CCDG5_0317 | Hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.915 |
rpsB | rpsD | CCDG5_1652 | CCDG5_0208 | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
rpsB | rpsG | CCDG5_1652 | CCDG5_1666 | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
rpsB | rpsH | CCDG5_1652 | CCDG5_0195 | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.998 |
rpsB | rpsI | CCDG5_1652 | CCDG5_0149 | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S9; High confidence in function and specificity; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
rpsB | rpsJ | CCDG5_1652 | CCDG5_0181 | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rpsB | rpsQ | CCDG5_1652 | CCDG5_0191 | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
rpsB | rpsS | CCDG5_1652 | CCDG5_0186 | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
rpsB | rsmA | CCDG5_1652 | CCDG5_0317 | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.834 |
rpsD | rpsB | CCDG5_0208 | CCDG5_1652 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
rpsD | rpsG | CCDG5_0208 | CCDG5_1666 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
rpsD | rpsH | CCDG5_0208 | CCDG5_0195 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
rpsD | rpsI | CCDG5_0208 | CCDG5_0149 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 30S ribosomal protein S9; High confidence in function and specificity; Belongs to the universal ribosomal protein uS9 family. | 0.991 |
rpsD | rpsJ | CCDG5_0208 | CCDG5_0181 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
rpsD | rpsQ | CCDG5_0208 | CCDG5_0191 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
rpsD | rpsS | CCDG5_0208 | CCDG5_0186 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
rpsD | rsmA | CCDG5_0208 | CCDG5_0317 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.858 |