node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplI | CCDG5_1489 | CCDG5_0693 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Hypothetical protein; Binds to the 23S rRNA. | 0.990 |
rplA | rplM | CCDG5_1489 | CCDG5_0148 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.995 |
rplA | rplT | CCDG5_1489 | CCDG5_0461 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
rplA | rpmI | CCDG5_1489 | CCDG5_0460 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Hypothetical protein; Family membership; Belongs to the bacterial ribosomal protein bL35 family. | 0.984 |
rplA | rpsB | CCDG5_1489 | CCDG5_1652 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | 0.994 |
rplA | rpsC | CCDG5_1489 | CCDG5_0188 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.994 |
rplA | rpsD | CCDG5_1489 | CCDG5_0208 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.987 |
rplA | rpsF | CCDG5_1489 | CCDG5_0609 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Hypothetical protein; Binds together with S18 to 16S ribosomal RNA. | 0.989 |
rplA | rpsO | CCDG5_1489 | CCDG5_1957 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.988 |
rplA | rpsR | CCDG5_1489 | CCDG5_0611 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.987 |
rplI | rplA | CCDG5_0693 | CCDG5_1489 | Hypothetical protein; Binds to the 23S rRNA. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.990 |
rplI | rplM | CCDG5_0693 | CCDG5_0148 | Hypothetical protein; Binds to the 23S rRNA. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.986 |
rplI | rplT | CCDG5_0693 | CCDG5_0461 | Hypothetical protein; Binds to the 23S rRNA. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.989 |
rplI | rpmI | CCDG5_0693 | CCDG5_0460 | Hypothetical protein; Binds to the 23S rRNA. | Hypothetical protein; Family membership; Belongs to the bacterial ribosomal protein bL35 family. | 0.928 |
rplI | rpsB | CCDG5_0693 | CCDG5_1652 | Hypothetical protein; Binds to the 23S rRNA. | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. | 0.986 |
rplI | rpsC | CCDG5_0693 | CCDG5_0188 | Hypothetical protein; Binds to the 23S rRNA. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.983 |
rplI | rpsD | CCDG5_0693 | CCDG5_0208 | Hypothetical protein; Binds to the 23S rRNA. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.988 |
rplI | rpsF | CCDG5_0693 | CCDG5_0609 | Hypothetical protein; Binds to the 23S rRNA. | Hypothetical protein; Binds together with S18 to 16S ribosomal RNA. | 0.991 |
rplI | rpsO | CCDG5_0693 | CCDG5_1957 | Hypothetical protein; Binds to the 23S rRNA. | Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.955 |
rplI | rpsR | CCDG5_0693 | CCDG5_0611 | Hypothetical protein; Binds to the 23S rRNA. | Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.992 |