STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDG5_0936AMP-dependent synthetase and ligase; High confidence in function and specificity. (556 aa)    
Predicted Functional Partners:
nifJ1
Pyruvate-flavodoxin oxidoreductase; High confidence in function and specificity.
  
 
 0.980
nifJ3
Pyruvate-flavodoxin oxidoreductase; High confidence in function and specificity.
  
 
 0.978
ADH2
Aldehyde-alcohol dehydrogenase 2; High confidence in function and specificity; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.977
CCDG5_0538
Citrate synthase; High confidence in function and specificity; Belongs to the citrate synthase family.
  
 0.975
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
 
 0.942
CCDG5_0919
Hypothetical protein; Family membership; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.920
leuA1
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
 
 0.918
CCDG5_1116
Putative AIPM/Hcit synthase family transferase aq_356; High confidence in function and specificity; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.918
leuA3
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.918
accC1
Biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.918
Your Current Organism:
Clostridium cellulosi
NCBI taxonomy Id: 29343
Other names: [. cellulosi, [Clostridium] cellulosi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.