STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDG5_1069Cell wall hydrolase/autolysin; High confidence in function and specificity. (245 aa)    
Predicted Functional Partners:
CCDG5_0305
Cell wall hydrolase/autolysin; High confidence in function and specificity.
  
  
 
0.906
radA
DNA repair protein RadA homolog; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
       0.810
CCDG5_1070
Hypothetical protein; Family membership.
       0.603
CCDG5_1071
ErfK/YbiS/YcfS/YnhG family protein; High confidence in function and specificity.
     
 0.449
CCDG5_0539
Putative membrane protein.
 
  
 0.447
CCDG5_1708
Hypothetical protein; Family membership.
  
  
 0.420
CCDG5_1738
gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I; High confidence in function and specificity.
  
  
 0.420
Your Current Organism:
Clostridium cellulosi
NCBI taxonomy Id: 29343
Other names: [. cellulosi, [Clostridium] cellulosi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.