Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDG5_2012GDP-fucose protein O-fucosyltransferase; High confidence in function and specificity. (381 aa)    
Predicted Functional Partners:
CCDG5_2010
Hypothetical protein; High confidence in function and specificity.
      
0.696
CCDG5_2011
Hypothetical protein; High confidence in function and specificity.
      
0.687
CCDG5_2009
Putative aminoglycoside phosphotransferase; High confidence in function and specificity.
       0.587
CCDG5_2013
Nucleoside-diphosphate-sugar epimerase; High confidence in function and specificity.
       0.494
CCDG5_2014
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; High confidence in function and specificity.
       0.494
CCDG5_2016
Mannose-1-phosphate guanylyltransferase; High confidence in function and specificity.
       0.447
CCDG5_2015
Dehydrogenase E1 component; High confidence in function and specificity.
       0.434
Gmd
GDP-mannose 4,6 dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.414
Your Current Organism:
Clostridium cellulosi
NCBI taxonomy Id: 29343
Other names: [. cellulosi, [Clostridium] cellulosi
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