Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ55230.1 | OPJ56036.1 | CLOTH_15330 | CLOTH_12140 | DNA-binding transcriptional regulator DhaR. | Blue-light-activated protein. | 0.682 |
| OPJ55230.1 | kinE | CLOTH_15330 | CLOTH_12130 | DNA-binding transcriptional regulator DhaR. | Sporulation kinase E. | 0.866 |
| OPJ55230.1 | rocR | CLOTH_15330 | CLOTH_00670 | DNA-binding transcriptional regulator DhaR. | Arginine utilization regulatory protein RocR. | 0.501 |
| OPJ55230.1 | ydaM_1 | CLOTH_15330 | CLOTH_10170 | DNA-binding transcriptional regulator DhaR. | Putative diguanylate cyclase YdaM. | 0.499 |
| OPJ56036.1 | OPJ55230.1 | CLOTH_12140 | CLOTH_15330 | Blue-light-activated protein. | DNA-binding transcriptional regulator DhaR. | 0.682 |
| OPJ56036.1 | kinE | CLOTH_12140 | CLOTH_12130 | Blue-light-activated protein. | Sporulation kinase E. | 0.999 |
| OPJ56036.1 | rocR | CLOTH_12140 | CLOTH_00670 | Blue-light-activated protein. | Arginine utilization regulatory protein RocR. | 0.707 |
| OPJ56036.1 | rpoN | CLOTH_12140 | CLOTH_08340 | Blue-light-activated protein. | RNA polymerase sigma-54 factor. | 0.652 |
| OPJ56036.1 | ydaM_1 | CLOTH_12140 | CLOTH_10170 | Blue-light-activated protein. | Putative diguanylate cyclase YdaM. | 0.999 |
| OPJ56782.1 | glyA | CLOTH_00640 | CLOTH_00660 | Hypothetical protein. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.630 |
| OPJ56782.1 | rocR | CLOTH_00640 | CLOTH_00670 | Hypothetical protein. | Arginine utilization regulatory protein RocR. | 0.468 |
| OPJ56782.1 | yjjP | CLOTH_00640 | CLOTH_00650 | Hypothetical protein. | Inner membrane protein YjjP. | 0.981 |
| OPJ56786.1 | OPJ56787.1 | CLOTH_00680 | CLOTH_00690 | Dihydrodipicolinate reductase. | Hypothetical protein. | 0.943 |
| OPJ56786.1 | glyA | CLOTH_00680 | CLOTH_00660 | Dihydrodipicolinate reductase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.408 |
| OPJ56786.1 | rocR | CLOTH_00680 | CLOTH_00670 | Dihydrodipicolinate reductase. | Arginine utilization regulatory protein RocR. | 0.436 |
| OPJ56787.1 | OPJ56786.1 | CLOTH_00690 | CLOTH_00680 | Hypothetical protein. | Dihydrodipicolinate reductase. | 0.943 |
| OPJ56787.1 | rocR | CLOTH_00690 | CLOTH_00670 | Hypothetical protein. | Arginine utilization regulatory protein RocR. | 0.400 |
| glyA | OPJ56782.1 | CLOTH_00660 | CLOTH_00640 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Hypothetical protein. | 0.630 |
| glyA | OPJ56786.1 | CLOTH_00660 | CLOTH_00680 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Dihydrodipicolinate reductase. | 0.408 |
| glyA | rocR | CLOTH_00660 | CLOTH_00670 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Arginine utilization regulatory protein RocR. | 0.664 |
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