Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56791.1Hypothetical protein. (452 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.969
oraS
D-ornithine 4,5-aminomutase subunit alpha.
 
     0.931
oraE
D-ornithine 4,5-aminomutase subunit beta.
 
     0.931
OPJ56792.1
Hypothetical protein; Alanine racemase, N-terminal domain.
 
     0.925
OPJ56787.1
Hypothetical protein.
 
     0.922
trpB
Tryptophan synthase beta chain.
 
     0.921
OPJ56786.1
Dihydrodipicolinate reductase.
 
     0.915
divIB
Cell division protein DivIB; Essential cell division protein.
  
 
 0.900
cwlC_1
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
   
 
 0.835
cwlC_2
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
   
 
 0.835
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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