Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
drrADaunorubicin/doxorubicin resistance ATP-binding protein DrrA. (311 aa)    
Predicted Functional Partners:
OPJ56794.1
ABC-2 family transporter protein.
 
 
 0.975
OPJ56795.1
ABC-2 family transporter protein.
 
 
 0.973
malF
Maltose transport system permease protein MalF.
    
 0.586
atpC
ATP synthase epsilon chain, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.552
ypdB
Transcriptional regulatory protein YpdB.
       0.551
ypdA_1
Sensor histidine kinase YpdA.
       0.542
OPJ55933.1
Putative multidrug export ATP-binding/permease protein.
 
 
0.527
OPJ55149.1
Fluoroquinolones export permease proteinc.
  
 
  0.514
OPJ55150.1
Fluoroquinolones export ATP-binding proteinc.
  
 
 
0.491
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.485
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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