Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ56794.1ABC-2 family transporter protein. (439 aa)    
Predicted Functional Partners:
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
 0.975
OPJ56795.1
ABC-2 family transporter protein.
 
   
0.878
ecsA_2
ABC-type transporter ATP-binding protein EcsA.
 
 
 0.681
albA_1
Albonoursin synthase.
  
  
 0.649
OPJ55150.1
Fluoroquinolones export ATP-binding proteinc.
 
 
 0.649
ytrB
ABC transporter ATP-binding protein YtrB.
  
 
 0.612
ecsA_1
ABC-type transporter ATP-binding protein EcsA.
  
 
 0.597
OPJ56423.1
CAAX amino terminal protease self- immunity.
   
  
 0.588
ypdB
Transcriptional regulatory protein YpdB.
       0.562
ypdA_1
Sensor histidine kinase YpdA.
       0.556
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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