Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glcRHTH-type transcriptional repressor GlcR. (253 aa)    
Predicted Functional Partners:
lacC
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.987
fruA_2
PTS system fructose-specific EIIBC component.
 
  
 0.977
fruA_1
PTS system fructose-specific EIIABC component.
 
  
 0.924
ywlF
Putative sugar phosphate isomerase YwlF.
    
 0.597
degA
HTH-type transcriptional regulator DegA.
  
   
 0.570
adhE
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.544
glcB
PTS system glucoside-specific EIICBA component.
  
  
 0.537
ptsG
PTS system glucose-specific EIICBA component.
  
  
 0.537
ccpA
Catabolite control protein A.
  
   
 0.536
malR
HTH-type transcriptional regulator MalR.
  
   
 0.532
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.