Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tsaAPutative peroxiredoxin. (179 aa)    
Predicted Functional Partners:
OPJ54937.1
Hypothetical protein.
  
 0.801
adhE
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 
 0.787
OPJ55820.1
Hypothetical protein.
  
 0.773
trxB_1
Thioredoxin reductase.
  
 
 0.771
trxB_2
Thioredoxin reductase.
  
 
 0.771
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.703
fur
Ferric uptake regulation protein; Belongs to the Fur family.
 
  
 0.697
OPJ54735.1
Hypothetical protein.
   
 
 0.673
sodB
Superoxide dismutase.
 
  
 0.621
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.600
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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