Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ56846.1 | albF | CLOTH_01280 | CLOTH_01290 | Peptidase M16 inactive domain protein. | Putative zinc protease AlbF. | 0.986 |
| OPJ56846.1 | ftsL_1 | CLOTH_01280 | CLOTH_01320 | Peptidase M16 inactive domain protein. | Cell division protein FtsL. | 0.571 |
| OPJ56846.1 | lgt | CLOTH_01280 | CLOTH_01300 | Peptidase M16 inactive domain protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.613 |
| OPJ56846.1 | rsmH_1 | CLOTH_01280 | CLOTH_01310 | Peptidase M16 inactive domain protein. | Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.609 |
| OPJ56846.1 | spoVD_1 | CLOTH_01280 | CLOTH_01330 | Peptidase M16 inactive domain protein. | Stage V sporulation protein D. | 0.533 |
| albF | OPJ56846.1 | CLOTH_01290 | CLOTH_01280 | Putative zinc protease AlbF. | Peptidase M16 inactive domain protein. | 0.986 |
| albF | ftsL_1 | CLOTH_01290 | CLOTH_01320 | Putative zinc protease AlbF. | Cell division protein FtsL. | 0.593 |
| albF | lgt | CLOTH_01290 | CLOTH_01300 | Putative zinc protease AlbF. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.627 |
| albF | rsmH_1 | CLOTH_01290 | CLOTH_01310 | Putative zinc protease AlbF. | Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.606 |
| albF | spoVD_1 | CLOTH_01290 | CLOTH_01330 | Putative zinc protease AlbF. | Stage V sporulation protein D. | 0.505 |
| alr | lgt | CLOTH_15550 | CLOTH_01300 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.625 |
| alr | spoVD_1 | CLOTH_15550 | CLOTH_01330 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Stage V sporulation protein D. | 0.554 |
| ftsL_1 | OPJ56846.1 | CLOTH_01320 | CLOTH_01280 | Cell division protein FtsL. | Peptidase M16 inactive domain protein. | 0.571 |
| ftsL_1 | albF | CLOTH_01320 | CLOTH_01290 | Cell division protein FtsL. | Putative zinc protease AlbF. | 0.593 |
| ftsL_1 | lgt | CLOTH_01320 | CLOTH_01300 | Cell division protein FtsL. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.716 |
| ftsL_1 | rsmH_1 | CLOTH_01320 | CLOTH_01310 | Cell division protein FtsL. | Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.741 |
| ftsL_1 | spoVD_1 | CLOTH_01320 | CLOTH_01330 | Cell division protein FtsL. | Stage V sporulation protein D. | 0.843 |
| gpsA | lgt | CLOTH_01590 | CLOTH_01300 | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.671 |
| hprK | lgt | CLOTH_17770 | CLOTH_01300 | HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...] | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.608 |
| hprK | spoVD_1 | CLOTH_17770 | CLOTH_01330 | HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...] | Stage V sporulation protein D. | 0.472 |
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