Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
yugIGeneral stress protein 13. (140 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
  0.911
glcB
PTS system glucoside-specific EIICBA component.
    
  0.873
ptsG
PTS system glucose-specific EIICBA component.
    
  0.873
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
  0.790
sacX_1
Negative regulator of SacY activity.
     
  0.642
malX_1
PTS system maltose- and glucose-specific EIICB component.
     
  0.642
sacX_2
Negative regulator of SacY activity.
     
  0.642
treB
PTS system trehalose-specific EIIBC component.
     
  0.642
iolC
5-dehydro-2-deoxygluconokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
  0.506
OPJ56888.1
Hypothetical protein.
       0.497
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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